課程名稱 |
後生遺傳調控機制新知 Frontiers in Epigenetic Regulatory Mechanisms |
開課學期 |
100-1 |
授課對象 |
生物資源暨農學院 生物科技研究所 |
授課教師 |
林劭品 |
課號 |
Biot8012 |
課程識別碼 |
642ED0140 |
班次 |
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學分 |
2 |
全/半年 |
半年 |
必/選修 |
選修 |
上課時間 |
星期一9,A(16:30~19:15) |
上課地點 |
生技所410 |
備註 |
本課程以英語授課。 限博士班 總人數上限:20人 外系人數限制:15人 |
Ceiba 課程網頁 |
http://ceiba.ntu.edu.tw/1001EpiRegulate |
課程簡介影片 |
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核心能力關聯 |
核心能力與課程規劃關聯圖 |
課程大綱
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課程概述 |
Depends on the background of the students, around 1/3 of the lectures will be given by the instructor for introducing basic concepts in Epigenetic regulation of gene silencing, including DNA methylation, modification of chromatin packaging proteins and functional non-coding RNAs. These will cover the physiological process including Genomic Imprinting, Sex Chromosome Compensation, Silencing of Endogenous Retrotransposons and Newly Infected Viral Sequences, Stem Cell Biology. In addition, the involvement of Epigenetic Regulatory Mechanisms in Carcinogenesis, Animal Cloning, Reprogramming and Regenerative Medicine will be discussed. For the rest of the classes, students will be assigned the most updated original research papers and conference articles as well as the milestone publications. They will be randomly divided into 2 groups for each assignment. One group will be presenting the articles and students in the other group are expected to challenge the papers from the experimental design, the methodology to the interpretation of the data. Students in the 1st group should defend for the papers as if it’s their manuscript. Students from the 2nd group should also provide constructive advice as how to improve the manuscript so that it can be published in a higher impact journal. |
課程目標 |
On top of learning the basic concepts of Epigenetic Regulatory Mechanisms, keeping abreast of the most updated research internationally, students are expected to develop the ability to critically evaluate and interpret published research articles. In addition, they will learn the art of reviewing as well as defending a manuscript for publication. |
課程要求 |
Preferably having studied one of the following subjects: (Introductory) Epigenetics, Special Topics in Reprogramming, Genetics and Epigenetics in Germ and Stem Cells |
預期每週課後學習時數 |
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Office Hours |
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指定閱讀 |
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參考書目 |
Updated journal articles and reviews; “Epigenetics: Concepts, Theories, Paradigms and Mechanisms” and “Stem cell and Regenerative Medicine” CD-Roms (A Henry StewartTalks Series in the Life Sciences), National and International Conference Abstracts and Papers |
評量方式 (僅供參考) |
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週次 |
日期 |
單元主題 |
第2週 |
9/19 |
Journal Club: Speaker: 士翔, 虹富
1. Postnatal loss of Dlk1 imprinting in stem cells and niche astrocytes regulates neurogenesis
2. Rethinking how DNA methylation patterns are maintained
3. Genomic imprinting as an adaptative model of developmental plasticity
4. Quiescent and active hippocampal neural stem cells with distinct morphologies respond selectively to physiological and pathological stimuli and aging |
第3週 |
9/26 |
Journal Club:Speaker: 凱維, 高文
1. Writer meets eraser in HOTAIR
2. Long intergenic noncoding RNAs: new links in cancer progression
3. RNA templating the epigenome: long noncoding RNAs as molecular scaffolds
4. Long noncoding RNA as modular scaffold of histone modification complexes
5. Evolution and functions of long noncoding RNAs |
第4週 |
10/03 |
Progress report:哿民,凱維 |
第5週 |
10/10 |
國慶日 (Bank Holiday) |
第6週 |
10/17 |
Journal Club:Speaker: 居凡, 維峻, 天祺
1. Epigenomics of human embryonic stem cells and induced pluripotent stem cells: insights into pluripotency and implications for disease
2. The Polycomb complex PRC2 and its mark in life
3. Genome-wide identification of polycomb-associated RNAs by RIP-seq |
第7週 |
10/24 |
Journal Club: Speaker: 清文, 高文, 仲浩
1. PIWI-interacting small RNAs: the vanguard of genome defence
2. Epigenetics, spermatogenesis and male infertility
3. The paternal epigenome and embryogenesis: poising mechanisms for development
-PiRNA & heterochromatin formation |
第8週 |
10/31 |
2011 Merck Millipore Asia Bioforum. Frontiers in Neuroscience: from Stem Cell to Systems Biology. 時間:100年10月31日(星期一)9:00 ~17:00; 地點:台大醫院 |
第9週 |
11/07 |
Journal Club:Speaker:哿民, 雅萍, 維峻
1.DNA-demethylation |
第11週 |
11/21 |
Progress report (廖虹富) |
第12週 |
11/28 |
Taiwan-UK Systems Biology Symposium |
第13週 |
12/05 |
Progress report (蕭士翔) |
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